BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F10LP1|AL426078
(803 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1553 1589 0.0
>3x_Contig1553
Length = 8593
Score = 1589 bits (801), Expect = 0.0
Identities = 802/803 (99%)
Strand = Plus / Minus
Query: 1 atcatatttaaggttaccactaggagtattgctagaattacatggatggtggcacttact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4587 atcatatttaaggttaccactaggagtattgctagaattacatggatggtggcacttact 4528
Query: 61 cactggcctcggcgtttatttctacatcgtatatttggaatacctaagaatatacattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4527 cactggcctcggcgtttatttctacatcgtatatttggaatacctaagaatatacattca 4468
Query: 121 tggaaaacgtgacgaatacgaaatgatatggagatggaaggttctacctgaagtggtcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4467 tggaaaacgtgacgaatacgaaatgatatggagatggaaggttctacctgaagtggtcat 4408
Query: 181 caaaacttctcatatcagcacaccattttctcatgaattcttaggatcatgtgtaacagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4407 caaaacttctcatatcagcacaccattttctcatgaattcttaggatcatgtgtaacagc 4348
Query: 241 cacatgccatcatctagaagaaagaagcaaatcagaatgattatagttcttgtcatactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4347 cacatgccatcatctagaagaaagaagcaaatcagaatgattatagttcttgtcatactc 4288
Query: 301 accttgagtcatcatgttcctatttatattatgagagcgaatcagtttacctcgcatatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4287 accttgagtcatcatgttcctatttatattatgagagcgaatcagtttacctcgcatatt 4228
Query: 361 taaaagaaaaaaaaagttttcctgttattaacactcttagttgcagttattgttttatta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4227 taaaagaaaaaaaaagttttcctgttattaacactcttagttgcagttattgttttatta 4168
Query: 421 tataacttactcatcttcctcttcatggataacctgcggtttgcatagaatatcactgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4167 tataacttactcatcttcctcttcatggataacctgcggtttgcatagaatatcactgta 4108
Query: 481 attacgtgacaagcttcgtatccacagttaatatggctgcataatgtcatacgaaaatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4107 attacgtgacaagcttcgtatccacagttaatatggctgcataatgtcatacgaaaatat 4048
Query: 541 agaaatgaaaatagtaaatataagataccagaaagttgcaacataaagctgacattaaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4047 agaaatgaaaatagtaaatataagataccagaaagttgcaacataaagctgacattaaat 3988
Query: 601 acagtcatatgaaagaratactatcgatcggcaccaatactacgaagtgcaatagattgt 660
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3987 acagtcatatgaaagaaatactatcgatcggcaccaatactacgaagtgcaatagattgt 3928
Query: 661 cagagatcataattatttcaaaggctccgtcgttaattgtgtactaatatgcctattcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3927 cagagatcataattatttcaaaggctccgtcgttaattgtgtactaatatgcctattcca 3868
Query: 721 cctttgtatacttcttctgcaggggatttcagatccgacacattcacgataccgacaaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3867 cctttgtatacttcttctgcaggggatttcagatccgacacattcacgataccgacaaaa 3808
Query: 781 gatttctggagccaagtgaccga 803
|||||||||||||||||||||||
Sbjct: 3807 gatttctggagccaagtgaccga 3785
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7097
Number of Sequences: 1807
Number of extensions: 7097
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 803
length of database: 10,358,551
effective HSP length: 16
effective length of query: 787
effective length of database: 10,329,639
effective search space: 8129425893
effective search space used: 8129425893
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)